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Join Legend
Serious alignment problem, requires review.
Zero, or more than one, overlaps
Half dove-tail &50 bp
Alignment identity &98%
Alignment length &50 bp
&2 gaps, each gap &25 bp, not marked as an SSR
&0 gaps, each gap &50 bp, not marked as an SSR
&0 gaps, each gap &500 bp, not marked as an SSR
&0 gaps, each gap &500 bp, marked as an SSR
Minor alignment problem.
Exactly one overlap
Half dove-tail &0 bp and <=50bp
Alignment identity &99.1%
Alignment length &2000 bp
&0 gaps, each gap &25 bp, not marked as an SSR
&0 gaps, each gap &50 bp, not marked as an SSR
&0 gaps, each gap &500 bp, not marked as an SSR
&0 gaps, each gap &500 bp, marked as an SSR
Excellent alignment, meets all defined criteria.
Exactly one RuleInfo
Half dove-tail &=0 bp
Alignment identity &=99.1%
Alignment length &=2000 bp
&=0 gaps, each gap &25 bp, not marked as an SSR
&=0 gaps, each gap &50 bp, not marked as an SSR
&=0 gaps, each gap &500 bp, not marked as an SSR
&=0 gaps, each gap &500 bp, marked as an SSR
Certificate submitted, not yet approved.
Certificate submitted and approved.
Valid, contained clone
Join not evaluated due to one accession not being finished.
Curator Links
Alignment for AC and AC
TypePoint1Point2Orient1Orient2CuratorCommentTimeIdAlignmentReleases
Switch Points
A10480412323++chenhcTaxid 10090 chrom 6 Primary assembly 16:53:14.8635916911385GRCm38, MGSCv37
Mismatches = 0, Gaps = 0, Length = 12322
Percent identity = 100%
Score = 2.443e+04 bits (12322), Expect = 0
3 BAC and 4 Fosmid bridging clones.
3 BAC and 4 Fosmid concordant clones.
0 BAC and 0 Fosmid discordant clones.
aattgatgctgtttatgtgaaattctagggaaacacaaactgccgtactccagggaggcg 92542
............................................................ 60
cgaggctaaggatgggagtgctaagtgcctgaggtgcaggggcagcttcaagtggaagga 92602
............................................................ 120
actttgcatcttagttaagtgggtttggctgaaagatcagaacaactactgaacgtcaca 92662
............................................................ 180
tacttagagtggattgatttagtttcctataaattacataaggggagaggtgagttaatg 92722
............................................................ 240
aagtgtaaagtctagagaaatcagttagctcgtactttcctgtgtgtcagtttagttgag 92782
............................................................ 300
cctttctatttgtgccttgggtagaaagaaagcaagaataaatatgggtccatgcttgtt 92842
............................................................ 360
ggtgtgtcggctcaatcacacactcagtgttaatgaggctttattttaaaatttactact 92902
............................................................ 420
aataatatcattttacgtttcttggttcacagcaggtaatttaacttttttccaagtacc 92962
............................................................ 480
tgtatatatttactgtcatttccctgtcaaattgatttcatccattgaattattatacaa 93022
............................................................ 540
ggggctgactaacttatcatgttttaacactcaagctttctcatttatgtgctgtatgtt 93082
............................................................ 600
ggcttttgtaaatgctttgactttgttttctaatgaatagaattgagtgctatgaaatgt 93142
............................................................ 660
tcagtgtgcccaagagattttatttcaagtgccaatacactttctttaattcatgtatgg 93202
............................................................ 720
aaaaaaatagtaacacttcattttctgcttaaatatataagcataacagataatgtacac 93262
............................................................ 780
caaagtgaaccatgtttaggaatcttaacttttgtaactaaagatgtaacatgcaggaaa 93322
............................................................ 840
gaaattctggtgaactctgtcctgataattgacaaacttcttttttagatgttgccctga 93382
............................................................ 900
ccttcaaggactcatgaatagtttgttgtttccttttgggctaagatgtgactggtttgt 93442
............................................................ 960
ggatggtgatgatggtggtggtggtggtgatgatgatgatgataatgatgataataatgt 93502
............................................................ 1020
tgttgttgttgtgttggtatttttaaatgcagtttggagacctgcagacactaagctcat 93562
............................................................ 1080
tactacttcaggtcttctgcaacagcatctgtgtaagaagagttgtgtaatgttttcttt 93622
............................................................ 1140
cttttcagttggaatcaacaggacttggccttagtagtagcagactaaaaacaactctaa 93682
............................................................ 1200
acagaattcaagaaagccttattgacctggtaagtaaccaattgtaattaatttacttga 93742
............................................................ 1260
gttatgtgaaacaaatagtcacaaaccaactgcatataaatatacacatatgaagtgtct 93802
............................................................ 1320
gagccctttagttatatcaagttcatacaggaagtaagaacctattgttaatagccttga 93862
............................................................ 1380
tgtatctccaattggccactgaagatctgtgttcagaaagtgtctgacatcactttataa 93922
............................................................ 1440
tcactttgaaattcaagagcaaagtttgcatgtgtggggttttttgtttgtttgtttgtt 93982
............................................................ 1500
ttgtttcgggggttgcttctttttttttttttttgtagcaggaactcctgggttttgact 94042
............................................................ 1560
ggtgtgtcagatgataaaatgcatggtttaagattatacaacaatgcaatgatgatacat 94102
............................................................ 1620
cttttgagaagtaatgactgggtatggtgatacatgcctctgatcccagcccttgggaga 94162
............................................................ 1680
gctcaaggaccacatgggctataaacagcgagactctcagaaataaaggaggaaatagta 94222
............................................................ 1740
agagaaaatggaaaagacagaaaaactgaaataattgttatataatattctgtgacttct 94282
............................................................ 1800
tagtgtacaaaacttttggcagtgaataaaagtagcaatccttatcttttgctctaaagt 94342
............................................................ 1860
gtgtgttctgtttagtggagaggcagttagacaaatgctttctgtagagtatgtgatacc 94402
............................................................ 1920
ctgctgggtcctgttgaatgctgtgatggctggagtggagacctgtgagcactgatggtg 94462
............................................................ 1980
tgactgaatgttgctgtcccagatggcactgctacagcagaagagcagaccacatggttc 94522
............................................................ 2040
caggatcccatttaccacctgcgtttacctcatcatctatacagtacatgcatacctaac 94582
............................................................ 2100
gctacgtcagtgttttataaatggtaatatgctatgtcctttagaagtaatgacatattc 94642
............................................................ 2160
agtacagatgtgtgccctacacctcaagtaattttgaattctggttggcaaaacacagac 94702
............................................................ 2220
acagacctgtgggtatggagagttgacagcacagctgtcccactgcctttattggcatat 94762
............................................................ 2280
agacatctccagaaatgttcatagtgtgcaagagtccttgtattctgatttagtctgact 94822
............................................................ 2340
tcttaggttttgatgtttattaatccttaatctttgtctcagataatggctccgtttttg 94882
............................................................ 2400
acccagcatttctttccttccttccctttgacctgcctgcctttgtttttaaggaatcca 94942
............................................................ 2460
tcagcttttgccactataaccattttccatgtttctttatgcattctctttgcctgggga 95002
............................................................ 2520
tgactctgaccatcagatcttattctgtgttgagcttagaactcaactgacgttcttctc 95062
............................................................ 2580
tttttctgacagaatgcttcaagagtgctgggtagagcttcatcattaaaatcattctgg 95122
............................................................ 2640
catttctccattatttctacaggttactagactagaattgttaaacctgagttttgaact 95182
............................................................ 2700
tgacctttaaggcatggatttatacttcaggttttgccacaaggcatataagagatcaca 95242
............................................................ 2760
cactaagtaaaccgtgggaaacatgccgttactcatcttcttggcaatggaatgcccatg 95302
............................................................ 2820
acatttgtctaactcttatggtgataacaattaatttgtgtcctagagtggtgaatttgt 95362
............................................................ 2880
caaatgtacagctgtatgttcaaaagtaacatgccttcctttcttgtttcctattttggg 95422
............................................................ 2940
cacttttttctaaacatgtcccagttttaagtgttatgttcatgttcttttaaatcaaaa 95482
............................................................ 3000
gattggctgaggaatagaaaatccatcattcatccttgagtgtataaggcccacctgtcc 95542
............................................................ 3060
agttcctgcagccagataactaacactccctcgaatatagtctacgttttcaaaatagtt 95602
............................................................ 3120
ttccatttgtttctggccgtcttgtttttttattgttttgtttttcctgttagtttctat 95662
............................................................ 3180
atctttgcatagataacagtcttgatttattgtttcaggaaatctcatttgctgtttaat 95722
............................................................ 3240
ataccttgatctaaattatttttaagttaacatgaacattaacttgtttccatgatgtca 95782
............................................................ 3300
gaaagtgtggtggagtcactgcattgtgtggataggccagtgataaatagcccaatcggc 95842
............................................................ 3360
ttggagaaagcagaaaacttctcacatcacttctatgtggctgttaaaactttagactta 95902
............................................................ 3420
cttttcatagttttattttctctatatgtatcttattttttacttttaagttataagtga 95962
............................................................ 3480
caaatggaaccattttgatactttaaaatgctacctgaaagaatttatcatataaattca 96022
............................................................ 3540
gtttaaaattttaatgtgtttccctcatcaaggggacgtctaagagaggaagtgcacatg 96082
............................................................ 3600
aggaagcaaccgttgctgatctcatgccagaaataagtctctactgttctgtttggtgac 96142
............................................................ 3660
tctcagtcactgttctattgctgcaagagatactatgaccaagacaattcttatcaaaga 96202
............................................................ 3720
aagcatttagttgaggcttgctttcagcttcataggcctggtccataatcctcatggcag 96262
............................................................ 3780
ggagcatgggacaggcaagcctggtgctggagaagtagtgcctgagagctgcatcctgat 96322
............................................................ 3840
ccacaagtgggaggcaacagatagacagagagacagagatagacactgggtctgctggca 96382
............................................................ 3900
tgggcttttgaaacctcaaagcctacccccagtgacaggattcctccagcaaggccacac 96442
............................................................ 3960
ctcttaatctttctaatcctagcaaagagttcactccctggcattcagatatatgagcct 96502
............................................................ 4020
gagagcgatttttattcaaaccacctgagtgatgataactacattgtttaaaacctttgg 96562
............................................................ 4080
ccaactttcttgcttgtttatttgagataaggccttcctgtatggcccaggctagcctca 96622
............................................................ 4140
gactagtgatctcctgtgtcagcctcgtaaagctgagatctcaggtgtgcaccaccacat 96682
............................................................ 4200
ccagtttgaatatttgattatttataaaaaacattttcaatttgaccaggaaatctgttg 96742
............................................................ 4260
atttatattctctttatagtggtaggataatggcagcaagaggcactaacatgacttctg 96802
............................................................ 4320
ccatgattagagagagtgaaatttctcttctgtcttcagagggcccgaggctcctctcaa 96862
............................................................ 4380
gaggccgatgttagctgaaactcagcactactggtccattgcatgataagcactccactt 96922
............................................................ 4440
atttttgtcagcctggaagtttttgtagctggctagctcagtgaaatatattttcttgtg 96982
............................................................ 4500
taagctcagtataagcaaatagttgccagaaaagttaatgcctgacatgccactgttagt 97042
............................................................ 4560
gggagccaaggagggcactagccagggagttccttttaatgcagtgataattttaccccc 97102
............................................................ 4620
tagatgccccctcagaaagagcacatgaattctttttctttgccattgagtatagtgacg 97162
............................................................ 4680
agttaggtgactgctgtgagaacagtgttgtcaacagcagtttctcctgtttcatagagg 97222
............................................................ 4740
atagcttgtccacccaggtacagctctattcaaatgtctggcgaatgtctggtccccagc 97282
............................................................ 4800
tacttcatttgagcactccttagctaagacctgacgacactctcaacttctctagactgc 97342
............................................................ 4860
ttatgatatttcttttatgttcaggaatgtgtgtgacatataacctccttactcaggtgc 97402
............................................................ 4920
caggcaaagatcatgtagtaaggatttgacatgagaatttccctgaccacggatgaacta 97462
............................................................ 4980
caatcatcgctgttggctacatcgttgtttgtgtgattcagtgtctcgtggccagtacca 97522
............................................................ 5040
aggactgcagggtatccatggccatctctcacctagattcacacagaccatctttgttct 97582
............................................................ 5100
cttagagagttgttatctttctctaggtctataactgcgttctagccctgccttcttgag 97642
............................................................ 5160
agtataccagattaccttgcttacagttttggttgtaaaatcattaattgaaccatatat 97702
............................................................ 5220
tgctatttcatcagtaattctcaaagaccagacccttgccttccagtttggggagacatt 97762
............................................................ 5280
gctctatgaacagttgtcagttacggaagatttcctgtgttgagtaactttatgttgtgt 97822
............................................................ 5340
acatatggtagcatgttgtattaggtaacatacggaattatcttaatttagcataaaaag 97882
............................................................ 5400
gaaaattccaatagttgcaaagcataaaagcaagaaagaagggctgaaactaagtctgta 97942
............................................................ 5460
agaactgtgcctgtgcctgtgagcgttcattgtattacgtagccgcggtcagtctgacct 98002
............................................................ 5520
ctttactattagacttgctgtttcaggtgtgtgtgtgctgtctttccaggagggctcagc 98062
............................................................ 5580
tgatccaactgccactctcacagcagccgaggaaagaaaggagaaggtacccagcccaca 98122
............................................................ 5640
cctcaatcagctagtgattttgacatctggggatacattgtatgggttggcagagagagt 98182
............................................................ 5700
ggtagccacagaatccttgtaagttgttgaaaacagttgctttgccataaatatttaagg 98242
............................................................ 5760
aaaattatgaaaagtaagcattgtgtaattatactttttgctatataatactcctcctct 98302
............................................................ 5820
tcctatgcaccacatagatgttaatgcagaatatatgttagcatagattactaattgatt 98362
............................................................ 5880
tttttagttgcatggttccatgtgtctgtgcgtatgtgtatgtgtgttcatgtgtttggg 98422
............................................................ 5940
agagctcgtgtttgtgcaggcatatgtctttgtatatatgagagccagagaactaccttg 98482
............................................................ 6000
gatatcattcctctgatgctgttcaactggtttttgagacaggatctctcattggcctag 98542
............................................................ 6060
agattgccaagtatgatagattgggtgaagagtgagcccagtgatccacttgtctctgcc 98602
............................................................ 6120
tgaccactgctgggattgcagtgtgcaccacccctggctttttatggttggctttaatta 98662
............................................................ 6180
tataaatcaaagttaaggagtatgtttagttttgatagtttagatagttaacaagatgat 98722
............................................................ 6240
ccttgttaagtaaaactgagtatatttctgcttcctggtagaatccatggtaattgtagt 98782
............................................................ 6300
ccactgttattgttacattttgagcatcagcaagaatgccttctgatctttctaaacccc 98842
............................................................ 6360
caagttaattcaattaaatcatgtaacttgttccataaggtgcagcccagtataaggtaa 98902
............................................................ 6420
atattctcttgtacataactgaaatccaagaaaagcagaattcagtggcagtgtatctgc 98962
............................................................ 6480
acttacccagagtatgtgtgcctgactgtcctgagagagtttgctgtattttaggaatgt 99022
............................................................ 6540
ttgttacttatgacaagtatccttttgaatctcttgagtttcagtgatttgaatatgttg 99082
............................................................ 6600
cgtggaattaaaagaaattctctaaaagacaagcagtggactggagacttggctctgcag 99142
............................................................ 6660
ttgagagcatgtgttgattttgtagaggacccaggttcaattcctaggattgacatggtg 99202
............................................................ 6720
cctcacaatcgcctataacctataaccctagtcccaggggatcccgtgccgtttttggcc 99262
............................................................ 6780
ttggtggtcgccaggcatgcacatgcaggcaaaacattctcatataaaataaataaatct 99322
............................................................ 6840
cttatttttaaaagacaagctctatattttttaggtttttctttttaaatgtttcctggg 99382
............................................................ 6900
ctcatatgttactatgagggggtatattcttccacaccttagagcctgagtatgtcctgg 99442
............................................................ 6960
aaaatgacttttcctttaacttataaatgaacatctgctgctgtatagtgatagggaaac 99502
............................................................ 7020
ttgtctagttcatagtataaagttactaaagtggaaacaattttcagttggttttgttct 99562
............................................................ 7080
taacagattcattacacaggaatgacaacaggttccaaatcctgcaataagtttacacca 99622
............................................................ 7140
tggttattcattctctttagagtgttcttggctgagcagtttgagttccttcagccacat 99682
............................................................ 7200
ttggatgctgtgatgcctgcagtcaaaaagcccttcctgcagcagttttactcccaggtc 99742
............................................................ 7260
agatgctcctgtctgtcatctcagctgtcagcactgtagagctgctgccatccctcaagc 99802
............................................................ 7320
tgtttgttagtttatcaatagagttcaggcaggttccaggagagctggacaaaatgctct 99862
............................................................ 7380
tctgtttgctcatgacttcctatgttagattaaacaacctagtgaacagctgggtaggga 99922
............................................................ 7440
gcaaactggggacacatgattgtcagagcagggaagaggagggtatctggagtgacaggc 99982
............................................................ 7500
aaaggcgccttatacatccaggctctcagcctggaactaggctgcattctaagggcacca 100042
............................................................ 7560
ggaaggtctgggagtgttggagaggggtgtgtgcttggaaaggaatctctggaggtgggt 100102
............................................................ 7620
aaagaatgttaaatggtaccccaggggtatgtgggggtgggggcaattgaaggctgttag 100162
............................................................ 7680
tgagaatggaatcccaagctaagagtaccaggaggaaagatgggggaagtggaaacaggg 100222
............................................................ 7740
ccattgtctcatgctaaaaatattttcttaattgaagtctccaattgtatattatatatt 100282
............................................................ 7800
ttacaaactagaaaagggtaaataattctttttaggtgtagcacttttagaaataattgt 100342
............................................................ 7860
tttttgtttctgtggaacatttcagacagtctcaactgccagtgaactgcgcaagcccat 100402
............................................................ 7920
ttactggattgtggctggtaaagctattgattatgaacagatgcttctcctaatgatgaa 100462
............................................................ 7980
tgtgaagtgggatgtcaaagagatcatgtcacagcacaacatctatgtagatgcattgct 100522
............................................................ 8040
gaaggcaagtactctgagaatttttgctaatgatcatttttattaagggatgtggctcta 100582
............................................................ 8100
aaatatgagattctagttgcttgctactcattcctggaatgggggcatcgggttgaatgt 100642
............................................................ 8160
gacctttacattttgtgcttttgatcggtgatacttgcagatttgtattttattttttta 100702
............................................................ 8220
attttgctccctagtttgtaacattgaattagtttggttattgtatgccatggctacctt 100762
............................................................ 8280
cctgatagaacccagtagttacacctctaaacacaaggcatttctgtttaactagtcacc 100822
............................................................ 8340
gctgtagctcagggtacattcctttggcaggaccatactcctgagtccggttgtgttgtc 100882
............................................................ 8400
tataacccgtgacttttgcaaggccttctggatcagctgtttgcatgcgatgcccgctta 100942
............................................................ 8460
tgtatgttccctaaaggagttgcagttcacctcttttcattcgtttgtcagttaatattt 101002
............................................................ 8520
atgaccacctgattataccagacctgacagaaatctgcctggatagttgctaattaagga 101062
............................................................ 8580
aaacatatgtgactttgaggaacagccatgttggtgtagaggtaggagtgcacagagcca 101122
............................................................ 8640
gaggtgtttagtatctattggtccataatgctgtgaaacaagcacacccggcagagagag 101182
............................................................ 8700
ggaatgatgtaggtgagaggcggatggcacttgttcgttctgctcacaggagtctaattc 101242
............................................................ 8760
tgaaagttaggaagtcgccgcatgaaatcactgataaggagtgtctgagaaaggaaagca 101302
............................................................ 8820
aattccgcagagctctgtccatttccgtcaacacagagaaaccaaactgtaaagtcctcg 101362
............................................................ 8880
tttttatctcatttgtaatcttcttagtaggctaggatacctgagaaccaatgaagctgt 101422
............................................................ 8940
agattagaacataggttaagtaaggttcgactgctgtgtttgaccacaacttatggtgct 101482
............................................................ 9000
cttctgtggggctgtcagctggctcaagactcaaaggctgtgcttagcagtgtctaggct 101542
............................................................ 9060
tagagatctaaagggtaactgagaagtacaagtctttgatatatatatatatattttttt 101602
............................................................ 9120
ttctgtcctggaactgagagatatttgtcttctgagatttcaattgctactttaaatttg 101662
............................................................ 9180
gaatggaaaaatcaagggcagtttatatataatggtaccttcttgtttcaaaacaatatg 101722
............................................................ 9240
ttctattttttcatgacgtttcctcattttattgaggcaatacacaaggttgttattttt 101782
............................................................ 9300
tgtttgtttggttttgttctgttttgtttgtcagagctcagacacctagaaagtccactg 101842
............................................................ 9360
tcaaggcttagacatattttctgtgaagtccatgctggtctcccaccagtatcctctttc 101902
............................................................ 9420
tggaacatgctcatgcaatgaaaaggggcaggcagctgacctgagcctcttttataaaag 101962
............................................................ 9480
tgccagtccccaggctggggactctgtcctcatgacctagttacttccaacactgtcacc 102022
............................................................ 9540
ctggggctgggagtgtagaggatgagcctcaggtaacaaaccttgcggaccacagcccat 102082
............................................................ 9600
gcggccatcggacactggggtaaaggcaaagaactctgggctcgctcggggcagggctct 102142
............................................................ 9660
caaaggcactgcttgtgtcaatatcttcattcccggaaaaccgattattctaaagaaaag 102202
............................................................ 9720
ccagtctcactcaagttctaaatctcaatctgtccttttttattggcccgaggccttctt 102262
............................................................ 9780
taagcctcaaagttaaccatctgatatcttctgttctctgttactctcctgaaactgggt 102322
............................................................ 9840
gaaagcaaaccgtgctgttgctctcaactgatcctgagtaaaatgcactgctttatctaa 102382
............................................................ 9900
ggagcagtgctcatgcacgccgaacttagcaataagtagtcggtttgtgtatgaagccta 102442
............................................................ 9960
gagctttctaacgtaaatattaatgaaaattaccaaactatgacttgaaacccaaagtgg 102502
............................................................ 10020
tttactgtagcaaatgcatgactatatcccgtagccaatgccgctgctctgtgaggctgt 102562
............................................................ 10080
gaaatggaacaactgatggagagcaattacttatttaactttgatttcagaaggtaagct 102622
............................................................ 10140
tagtgaattggaggcacattcttccaaaaaataattaaaagcaatgaactgttaaaaatc 102682
............................................................ 10200
aattggcaagaaaaactgtgacctgtgatgtagccacagagcagtggggactgccgctga 102742
............................................................ 10260
cactgtggtgatggtgacacctgggctgagctcacctgtcaccctgtgttccattaggtc 102802
............................................................ 10320
ctgccatgctcaacagcatgtcactttctatccagaaaacttgagaaagattccacctta 102862
............................................................ 10380
acccttcttaaatgtgttctcataaggagtcagggacactccttttgtttgcgcatttgt 102922
............................................................ 10440
catagtagcccaacgagactatccactcaaaatgaatttcttcactgctgttacaaagtc 102982
............................................................ 10500
acccatggtccctaatataatcttatgaaagttaagagctcatagaaaatattttatggt 103042
............................................................ 10560
tattttcctttgtattaaaattttgtgactgtgaggtgactttcaaatcattttttaaat 103102
............................................................ 10620
gttacataatgattaggaaagaaaattatatgccaggttttttatttatcagaaatacaa 103162
............................................................ 10680
gctgtgaatagttagctttgagttgaaagcttattaaaatagactttagaatcggaggaa 103222
............................................................ 10740
ccacgagaacatagccgacagaattaactgagtcatgggaactcagagagagcagcgagc 103282
............................................................ 10800
ctatagggtctgacctaagtcctttgtatgcatgctataactgagtagcagttgttcttg 103342
............................................................ 10860
tgagactcctagcagtggaagtgcgggctgtccctccgtcttttgcctacttgtaggata 103402
............................................................ 10920
ggactctttttctcctactggattgccttgcccagtcttgtcgagatggtttgttttagc 103462
............................................................ 10980
ttcttatgccttgtttggttgatgtcccctgaaatgcctgctcttgtctgaggggaggca 103522
............................................................ 11040
ggggttgggagtcgttctgggagactggggaagtgcagggaagagatgggggaggagaga 103582
............................................................ 11100
gaagaaactgcagtcgggatataatatatgagagaagaatattttttaaaaaaacaaaaa 103642
............................................................ 11160
ctgtttcttcaagccaatagatttttttagtccatggtagattatcatagaaaatattta 103702
............................................................ 11220
ggcatgatttataaggtttagtcaatctattatatttatttctccttagataaattctct 103762
............................................................ 11280
tgtaacatgtattatgctttttcttaaaatgtttatttgtttacttttgtgaagaagaga 103822
............................................................ 11340
gatctacatgggtctctttgtgagtgggtcttgcacaaaagggccttaacctactgagcc 103882
............................................................ 11400
attttgctagacctggttatatttttaaaatcttttcactaagtccaaattgtctatggt 103942
............................................................ 11460
ataaatacccaccaccccatttttctttcttgcttcatttagttaatagctacatctctg 104002
............................................................ 11520
ggtgttctttgttttgttttattttttaaaaataattgtttgtgggaaaatattgtggca 104062
............................................................ 11580
ttaaaattatacccatgcctcgcctccctcttaggaatttgagcagtttaacaagcggtt 104122
............................................................ 11640
aaatgaagtttctaagagagttcggatacctctgcctgtatcaaatatactttgggagca 104182
............................................................ 11700
ttgtatacgattagctaacagaactattgtggaagggtaagtttcatgaacgcagtagtt 104242
............................................................ 11760
gtttcttaaattataatgtagtaaatgaatgtcatctgatttaatggatagcaatgatga 104302
............................................................ 11820
tcagtagcagaagtactcaatctcaagcgtgagaaggagtcataggtcagtgtgcctgct 104362
............................................................ 11880
ccctgtgggttattctattgatactgacattgagccaagatagcagatgaatgaggaata 104422
............................................................ 11940
cagagccattagattatctgaaagtagaactgataattagtatctaataagttctgtgag 104482
............................................................ 12000
tattcctatcatttattgaacattatttactgaaccaaagatttcacagattttattggc 104542
............................................................ 12060
aaatcctgacttgcctcagcttataattgtcggtggaaagtcttgggtaaggaagtccag 104602
............................................................ 12120
acttacagactatgtagcttgtcccagtccacagtgttcagaagcagggaaggcttctgc 104662
............................................................ 12180
gtgcctggtactcagacttcaggtcgcctgtgtctccagtctgtccacgggagctttccc 104722
............................................................ 12240
tcttacttgacatcatccctactctgggcatacatatcatctgacgcaaagaagaaaatg 104782
............................................................ 12300
ggcccaagaggcaaacagctct 104804
...................... 12322
IdTypeDateWhodidComment
18037ImportOldDb09/06/:00f_old_db
18038ReSetShortOvlp09/04/:48dbo
169926CreateSwitchPt11/20/:14chenhctpf_builder 1.6
Toolkit wrapper version: built Nov 19 2008 using /netopt/ncbi_tools64/c++.by-date//GCC401-Release64/lib
Accession%idPosition (strand) Accession%idPosition (strand)
C3H-134P8&AC99.42%pos 130466 (F+) C3H-144M6&AC99.73%pos 173083 (F+) C3H-15I2AC99.86%pos 51964 (R-) &C3H-15J1AC99.87%pos 51975 (R-) &C3H-172G8AC99.49%pos 78605 (R+) &CH29-112I14AC99.28%pos 77633 (R+) &CH29-162F10AC99.15%pos 108508 (R-) AC99.58%pos 5623 (F+) CH29-23I10AC99.18%pos 82328 (R-) &CH29-506D9AC99.58%pos 16512 (R-) &CH29-515I5&AC99.59%pos 61723 (F+) CH29-519D10&AC99.4%pos 78529 (F-) CH29-566D8&AC99.05%pos 95385 (F+) CH29-606G2AC99.18%pos 107433 (R-) &CH29-610F11AC100%pos 108894 (R+) &CH29-71H10&AC100%pos 81615 (F+) &AC100%pos 81615 (F+) CH29-72D22&AC99.71%pos 161469 (F+) CH29-74K15AC99.38%pos 37819 (R+) AC99.62%pos 134538 (F-) RP23-225H3&AC99.23%pos 55229 (F+) RP24-193M22AC99.38%pos 11353 (R+) &AC99.38%pos 103835 (R+) &RP24-284E17&AC99.6%pos 41371 (F+) RP24-287B9AC99.85%pos 158722 (R-) AC99.11%pos 6372 (F+) &AC99.11%pos 98854 (F+) RP24-315G2AC99.11%pos 30825 (R-) &RP24-323G2AC99.31%pos 50883 (R+) AC99.87%pos 71014 (F-) RP24-363A22&AC99.83%pos 44709 (F+) RP24-374M7&AC100%pos 100335 (F-)
Fosmid Ends
Accession%idPosition (strand) Accession%idPosition (strand)
WI1-1093G10AC99.78%pos 13943 (R+) AC100%pos 55841 (F-) WI1-1130H21AC100%pos 54900 (R-) AC100%pos 9701 (F+) WI1-1263E23AC100%pos 80668 (R+) AC99.16%pos 26500 (F-) WI1-1312N8AC100%pos 42618 (R-) AC99.63%pos 1993 (F+) WI1-1316P24AC99.82%pos 170064 (R+) &WI1-1391D10AC99.72%pos 37944 (R+) AC100%pos 74147 (F-) WI1-145D23&AC99.84%pos 15530 (F-) WI1-145P19&AC100%pos 15543 (F-) WI1-1507P18AC100%pos 67848 (R-) AC99.83%pos 28421 (F+) WI1-1558N20&AC99.85%pos 71088 (F-) WI1-1565F14AC99.43%pos 113905 (R-) AC99.29%pos 76011 (F+) WI1-168M1AC100%pos 152463 (R+) &WI1-1827D16AC100%pos 125848 (R-) AC100%pos 87276 (F+) WI1-2009D6AC100%pos 64585 (R+) AC99.74%pos 17031 (F-) WI1-2500A24AC100%pos 77579 (R+) &WI1-250P6&AC99.85%pos 37687 (F-) WI1-2705G9&AC100%pos 34380 (F-) WI1-2733M11AC100%pos 135162 (R+) &WI1-2740B7&AC100%pos 4025 (F-) WI1-2903K1AC100%pos 12775 (R-) &WI1-325P3&AC100%pos 171921 (F+) WI1-326M3AC100%pos 82391 (R-) AC99.74%pos 44235 (F+) WI1-435B17AC100%pos 131884 (R+) AC99.83%pos 171631 (F-) WI1-493C5AC100%pos 26624 (R+) AC100%pos 63388 (F-) WI1-796H16&AC99.45%pos 148053 (F-) WI1-813K18&AC99.82%pos 24484 (F-) WI1-846B18&AC100%pos 9711 (F-) WI1-926P16AC99.52%pos 174818 (R+) &WI1-993E21AC100%pos 47278 (R-) AC100%pos 5115 (F+) &AC100%pos 97597 (F+) WI1-993H24AC100%pos 53732 (R-) AC100%pos 10281 (F+) &AC100%pos 102763 (F+)
hAT-Charlie
TcMar-Tigger
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
ERVB7_1-LTR_MM
RLTR17B_Mm
RLTR17B_Mm
ORR1C2-int
TcMar-Tigger
Low_complexity
Low_complexity
Low_complexity
Simple_repeat
Low_complexity
MLTR31F_MM
Low_complexity
Simple_repeat
Simple_repeat
Low_complexity
Simple_repeat
RLTR20C1_MM
RLTR34B_MM
RLTR34B_MM
RLTR34B_MM
Low_complexity
Low_complexity
Simple_repeat
Simple_repeat
Simple_repeat
Low_complexity
Simple_repeat
IAPLTR1a_Mm
IAPLTR1a_Mm
hAT-Charlie
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Low_complexity
Low_complexity
MMERVK9E_I-int
MMERVK9C_I-int
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Simple_repeat
TcMar-Tigger
Low_complexity
Low_complexity
TcMar-Mariner
Simple_repeat
Simple_repeat
Simple_repeat
hAT-Charlie
Low_complexity
Simple_repeat
Low_complexity
TcMar-Tigger
hAT-Charlie
Simple_repeat
Low_complexity
Simple_repeat
hAT-Tip100
RLTR31C_MM
Simple_repeat
Charlie18a
hAT-Charlie
Charlie26a
hAT-Charlie
Low_complexity
TcMar-Tigger
Simple_repeat
Simple_repeat
Simple_repeat
hAT-Charlie
Low_complexity